The detailed information of tRNA gene sequence


Sequence ID>WENV180094796
Genome IDMTBK01031042
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10214
End posion on genome 10141
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
accaaatttt
tRNA gene sequence 
ACGGGTGTAGCTCAATTGGTAGAGCGATGGTCTCCAAAACCATAGGCTGTGGGTTCGAAA
CCTGCCACCCGTGCtt
Downstream region at tRNA end position 
aaaatttaat
Secondary structure (Cloverleaf model)
>WENV180094796	Trp	CCA
                   t      GCtt aaaatttaat
                     A - T
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          A A
                    T     C G T C C     A
      T A A        A      | + + | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCT
                    A - T
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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