The detailed information of tRNA gene sequence


Sequence ID>WENV180094799
Genome IDMTBK01031183
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 61
End posion on genome 135
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aaatattttt
tRNA gene sequence 
GGGCCTTTAGCTCAGTTGGTTAGAGCGCCCGGCTCATAACCGGTAGGTCCAAGGTTCGAG
TCCTTGAAGGCCCACtt
Downstream region at tRNA end position 
ttatttctaa
Secondary structure (Cloverleaf model)
>WENV180094799	Ile2	CAT
                   t      ACtt ttatttctaa
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     T - A          T G
                    T     G T T C C     A
      T G A        A      | | | | |     G
    T       C T C G       C A A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C   T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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