The detailed information of tRNA gene sequence


Sequence ID>WENV180094804
Genome IDMTBK01031592
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 649
End posion on genome 725
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cgaggtgtac
tRNA gene sequence 
GGCGCAGTAGTTCAGACGGTTAGAATGCCAGCCTGTCAAGCTGGAGGTCGAGGGTTCGAG
TCCCTTCTGCGTCGCCA
Downstream region at tRNA end position 
aacagttgcc
Secondary structure (Cloverleaf model)
>WENV180094804	Asp	GTC
                   c      GCCA aacagttgcc
                     G - C
                     G + T
                     C - G
                     G - C
                     C - G
                     A - T
                     G - C          T G
                    T     T T C C C     A
      A G A        A      + | | | |     G
    C       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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