The detailed information of tRNA gene sequence


Sequence ID>WENV180094816
Genome IDMTBK01032484
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1069
End posion on genome 996
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gatgtaagaa
tRNA gene sequence 
CGGGGTGTAGTTCAGATGGCTAGAACGCTACGTTCGGGACGTAGAGGTCGTCCGTTCAAG
TCGGATCACCCCGAtat
Downstream region at tRNA end position 
atatctttat
Secondary structure (Cloverleaf model)
>WENV180094816	Pro	CGG
                   a      Atat atatctttat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T A G G C     A
      A G A        A      + | | | |     A
    T       C T T G       G T C C G     C
    G       | | | |                 T T
    G       G A A C
      C T A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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