The detailed information of tRNA gene sequence


Sequence ID>WENV180094821
Genome IDMTBK01032969
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 555
End posion on genome 628
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggcaacaac
tRNA gene sequence 
CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGACCGCAGGTTCGAGT
CCTGTCGCCCCGACac
Downstream region at tRNA end position 
tagccgctgt
Secondary structure (Cloverleaf model)
>WENV180094821	Pro	TGG
                   c      ACac tagccgctgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    G       T G C G       G C A G G     C
    G       + | | |                 T T
    C       G C G C
      T A          G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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