The detailed information of tRNA gene sequence


Sequence ID>WENV180094826
Genome IDMTBK01033194
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1824
End posion on genome 1748
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
cgtatagtca
tRNA gene sequence 
CGGGGTGTGGCGTAGTTGGCTAGCGCGCAGCGTTCGGGACGCTGAGGTCGCCCGTTCAAA
TCGGGTCACCCCGACCA
Downstream region at tRNA end position 
atctaaagat
Secondary structure (Cloverleaf model)
>WENV180094826	Pro	CGG
                   a      ACCA atctaaagat
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G G G C     A
      T G A        G      + | | | |     A
    T       T G C G       G C C C G     C
    G       + | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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