The detailed information of tRNA gene sequence


Sequence ID>WENV180094828
Genome IDMTBK01033389
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3457
End posion on genome 3529
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
atgagcttgt
tRNA gene sequence 
GCGGGTGTAGTTCAATGGTAGAACGTCTCCTTGCCAAGGAGAAGGTTTGAGAGTTCGAGT
CTCTTCGCCCGCTttc
Downstream region at tRNA end position 
tgaacacacg
Secondary structure (Cloverleaf model)
>WENV180094828	Gly	GCC
                   t      Tttc tgaacacacg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     T T C T C     A
        A A        A      + | | | |     G
      T     C T T G       G A G A G     C
      G     | | | |                 T T
      G     G A A C
        T A        G     AGGTTT
                    T - A
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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