The detailed information of tRNA gene sequence


Sequence ID>WENV180094829
Genome IDMTBK01033389
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3585
End posion on genome 3656
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcttttact
tRNA gene sequence 
GGCGACGTAGCCAAGTTGGCAAGGCAGGGGTCTGCAAAACCCTCATCACGGGTTCGAGTC
CCGTCGTCGCCTtaa
Downstream region at tRNA end position 
gattaacgaa
Secondary structure (Cloverleaf model)
>WENV180094829	Cys	GCA
                   t      Ttaa gattaacgaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     G - C          T G
                    T     T G C C C     A
      T G A        A      | | | | |     G
    T       A C C G       A C G G G     C
    G         | | |                 T T
    G       A G G C
      C A          A     CATC
                    G + T
                    G - C
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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