The detailed information of tRNA gene sequence


Sequence ID>WENV180094834
Genome IDMTBK01033985
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 360
End posion on genome 283
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ataacttggt
tRNA gene sequence 
CGGGGCGTAGCGTAGCCTGGCTAGCGCGTCTGAATGGGGTTCAGAAGGTCGAGAGTTCGA
ATCTCTCCGCCCCGACCA
Downstream region at tRNA end position 
tttgaaacgg
Secondary structure (Cloverleaf model)
>WENV180094834	Pro	GGG
                   t      ACCA tttgaaacgg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     C T C T C     A
    C C G A        A      | | | | |     G
  T         T G C G       G A G A G     C
  G         + | | |                 T T
  G         G C G C
    C T A          G     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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