The detailed information of tRNA gene sequence


Sequence ID>WENV180094836
Genome IDMTBK01034305
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3324
End posion on genome 3230
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttattaaac
tRNA gene sequence 
GGAGAGATGGCTGAGTCCGGTTGAAAGCGCACGACTCGAAATCGTGTGAGCCGTTTGTAG
CGGCTCCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
tttaaaaaaa
Secondary structure (Cloverleaf model)
>WENV180094836	Ser	CGA
                   c      GCCA tttaaaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  C         G T C G       G T G G G     C
  G           | | |                 T T
  G         A A G C
    T T G A        G     TGAGCCGTTTGTAGCGGCTCC
                    C - G
                    A - T
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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