The detailed information of tRNA gene sequence


Sequence ID>WENV180094837
Genome IDMTBK01034305
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3063
End posion on genome 2968
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aagcaaatat
tRNA gene sequence 
GGAGAGGTGGCTGAGCTTGGCTGAAGGCGCTCGATTGGAAATCGAGTAGGCGGGCTAAAA
CCTGCCTCGCGGGTTCAAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ttaaagaatt
Secondary structure (Cloverleaf model)
>WENV180094837	Ser	GGA
                   t      GCCA ttaaagaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T C G A        G      | | | | |     A
  T         G T C G       G C G G G     C
  G           + | |                 T T
  G         A G G C
    C T G A        G     TAGGCGGGCTAAAACCTGCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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