The detailed information of tRNA gene sequence


Sequence ID>WENV180094838
Genome IDMTBK01034377
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 346
End posion on genome 273
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
attcgttttt
tRNA gene sequence 
GGCGGCGTACCCAAATGGCTAAGGGGACGGTCTGCAAAACCGTTATCTACCGGTTCAATT
CCGGTCGCCGCCTCag
Downstream region at tRNA end position 
atggaattta
Secondary structure (Cloverleaf model)
>WENV180094838	Cys	GCA
                   t      TCag atggaattta
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C          T T
                    T     T G G C C     A
      T A A        A      | | | | |     A
    G       A C C C       A C C G G     C
    G         | | |                 T T
    C       A G G G
      T A          G     TATCT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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