The detailed information of tRNA gene sequence


Sequence ID>WENV180094839
Genome IDMTBK01034381
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 162
End posion on genome 72
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggacggcaac
tRNA gene sequence 
GGAGACGTGGCCGAGTGGCTGAAGGCACTCGTTTGCTAAATGAGCATACTCCAAAAGGGT
ATCGAGGGTTCGAATCCCTCCGTCTCCGCCA
Downstream region at tRNA end position 
ttcctgaata
Secondary structure (Cloverleaf model)
>WENV180094839	Ser	GCT
                   c      GCCA ttcctgaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        A     CATACTCCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    G + T
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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