The detailed information of tRNA gene sequence


Sequence ID>WENV180094845
Genome IDMTBK01034615
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2381
End posion on genome 2454
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tggagtgcct
tRNA gene sequence 
GGGGATGTAGCTTAGTCGGGAGAGCGCCTCCTTTGCAAGGAGGAGGTCAGGGGTTCGAGT
CCCCTCATCTCCACtg
Downstream region at tRNA end position 
taagctctgg
Secondary structure (Cloverleaf model)
>WENV180094845	Ala	TGC
                   t      ACtg taagctctgg
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T G
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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