The detailed information of tRNA gene sequence


Sequence ID>WENV180094846
Genome IDMTBK01034625
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 3577
End posion on genome 3501
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tatagagatt
tRNA gene sequence 
CGGGATGTAGCTCAGTCCGGTTTAGAGTACTCGTCTGGGGGGCGAGGGGTCGGAAGTTCG
AATCTTCTCATCCCGACaa
Downstream region at tRNA end position 
aacacagttc
Secondary structure (Cloverleaf model)
>WENV180094846	Pro	GGG
                   t      ACaa aacacagttc
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T T C     A
    C T G A        A      + | | | |     G
  C         C T C G       G G A A G     C
  G         | | | +                 T T
  G         G A G T
    T T T A        A     GGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    T + G
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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