The detailed information of tRNA gene sequence


Sequence ID>WENV180094850
Genome IDMTBK01034782
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 912
End posion on genome 837
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatatgttgc
tRNA gene sequence 
AGGACAGTAGCTCAATTGGCAGAGCATCGGTCTCCAAAACCGAGGGCTGCGGGTTCGATT
CCTGCCTGTCCTGCCA
Downstream region at tRNA end position 
acatttcttt
Secondary structure (Cloverleaf model)
>WENV180094850	Trp	CCA
                   c      GCCA acatttcttt
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          A     GGGCT
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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