The detailed information of tRNA gene sequence


Sequence ID>WENV180094854
Genome IDMTBK01034846
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 90
End posion on genome 161
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aactcctgaa
tRNA gene sequence 
GGGCCTGTAGCTCAATGGCGGAGCAGGCGGCTCATAACCGCTTGGTTGAAGGTTCGAATC
CTTCCGGGCCCAtgt
Downstream region at tRNA end position 
ttcatttaat
Secondary structure (Cloverleaf model)
>WENV180094854	Ile2	CAT
                   a      Atgt ttcatttaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T A
                    T     C T T C C     A
        A A        A      | | | | |     G
      T     C T C G       G A A G G     C
      G     | | | |                 T T
      G     G A G C
        C G        A     TGGTT
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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