The detailed information of tRNA gene sequence


Sequence ID>WENV180094855
Genome IDMTBK01034995
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 238
End posion on genome 151
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aacaattaac
tRNA gene sequence 
GGTGAGGTGGGTGAGTGGCTAAAACCAGCAGTTTGCTAAACTGCCGTACGGGCAACCGTA
CCGCGGGTTCGAATCCCGCTCTCACCGCtt
Downstream region at tRNA end position 
ttaaactcct
Secondary structure (Cloverleaf model)
>WENV180094855	Ser	GCT
                   c      GCtt ttaaactcct
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C G C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G C G G G     C
    G         | | |                 T T
    C       A A C C
      T A A        A     CGTACGGGCAACCGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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