The detailed information of tRNA gene sequence


Sequence ID>WENV180094860
Genome IDMTBK01035264
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 777
End posion on genome 703
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
gttgtcaagt
tRNA gene sequence 
TGGGGTGTCGTCTAATTGGCAGGACACTGGACTTTGGCTCCAGCAGTGTAGGTTCGAGTC
CTACCGCCCCAGCCA
Downstream region at tRNA end position 
gcagaaaaca
Secondary structure (Cloverleaf model)
>WENV180094860	Gln	TTG
                   t      GCCA gcagaaaaca
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C A T C C     A
      T A A        C      | | | | |     G
    T       T C T G       G T A G G     C
    G       + | | |                 T T
    G       G G A C
      C A          A     CAGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       C
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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