The detailed information of tRNA gene sequence


Sequence ID>WENV180094893
Genome IDMTBK01038071
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1179
End posion on genome 1254
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttaccgtagc
tRNA gene sequence 
AGGGGAGTAGCTCAATCGGTAGAGCACTGGTCTCCAAAACCAGGGGCTGCGGGTTCGAGT
CCTGTCTCCCCTGCCA
Downstream region at tRNA end position 
tctattttaa
Secondary structure (Cloverleaf model)
>WENV180094893	Trp	CCA
                   c      GCCA tctattttaa
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G T C C     A
      T A A        A      + | + | |     G
    C       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGCT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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