The detailed information of tRNA gene sequence


Sequence ID>WENV180094894
Genome IDMTBK01038095
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1064
End posion on genome 1137
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
attcgtgttt
tRNA gene sequence 
CGGGGCGTAGCCTAGTGGCTATGGCGCCTGCTTTGGGAGCAGGATATCGAAGGTTCGAGT
CCTTTCGCCCCGACaa
Downstream region at tRNA end position 
gaaaccaagg
Secondary structure (Cloverleaf model)
>WENV180094894	Pro	TGG
                   t      ACaa gaaaccaagg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T T T C C     A
      T G A        A      + | | | |     G
    G       T C C G       G A A G G     C
    G         | | |                 T T
    C       T G G C
      T A          G     ATATC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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