The detailed information of tRNA gene sequence


Sequence ID>WENV180094895
Genome IDMTBK01038119
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 9603
End posion on genome 9676
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
gcgaaatgtc
tRNA gene sequence 
GGGCCCTTAGCTCAGTTGGTCAGAGCTGCGGACTCATAATCCGTAGGTCGCTGGTTCAAG
TCCAGCAGGGCCCAaat
Downstream region at tRNA end position 
tcaaattgct
Secondary structure (Cloverleaf model)
>WENV180094895	Ile2	CAT
                   c      Aaat tcaaattgct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     C G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       G C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        T     AGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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