The detailed information of tRNA gene sequence


Sequence ID>WENV180094905
Genome IDMTBK01038754
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 566
End posion on genome 490
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
caccatttgc
tRNA gene sequence 
GGCCTGGTAGTTCAGCTGGTTAGAATGCCAGCCTGTCACGCTGGAGGTCGAGGGTTCGAG
TCCCTTCCAGGTCGCCA
Downstream region at tRNA end position 
acttaattaa
Secondary structure (Cloverleaf model)
>WENV180094905	Asp	GTC
                   c      GCCA acttaattaa
                     G - C
                     G + T
                     C - G
                     C - G
                     T - A
                     G - C
                     G - C          T G
                    T     T T C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G A G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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