The detailed information of tRNA gene sequence


Sequence ID>WENV180094916
Genome IDMTBK01038806
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 389
End posion on genome 465
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgaatatcaa
tRNA gene sequence 
GGCCCTGTGGCGCAGTTGGTTAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAG
TCCCGTCAGGGTCGCCA
Downstream region at tRNA end position 
tctcggcaag
Secondary structure (Cloverleaf model)
>WENV180094916	Asp	GTC
                   a      GCCA tctcggcaag
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     G - C          T G
                    T     T G C C C     A
      T G A        G      + | | | |     G
    T       C G C G       G C G G G     C
    G       | | | |                 T T
    G       G C G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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