The detailed information of tRNA gene sequence


Sequence ID>WENV180094920
Genome IDMTBK01038842
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 117
End posion on genome 205
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcaggattcc
tRNA gene sequence 
GGAGAGGTGTAGGAGTGGCTGAACTAGCACGCCTGGAAAGCGTGTGTTCCCCAAAAGGGA
ACCGGGGGTTCGAATCCCCCTCTCTCCGCtc
Downstream region at tRNA end position 
tttttaatat
Secondary structure (Cloverleaf model)
>WENV180094920	Ser	GGA
                   c      GCtc tttttaatat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A T       G G G G G     C
    G         | | |                 T T
    C       A C T A
      T G A        G     TGTTCCCCAAAAGGGAACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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