The detailed information of tRNA gene sequence


Sequence ID>WENV180094921
Genome IDMTBK01038883
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1012
End posion on genome 1086
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tcatctccgc
tRNA gene sequence 
CGGGGTGTAGCGCAGTCGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGACGGTTCGAG
TCCGCCCACCCCGACtt
Downstream region at tRNA end position 
ttttataagt
Secondary structure (Cloverleaf model)
>WENV180094921	Pro	TGG
                   c      ACtt ttttataagt
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T G A        A      |   | | |     G
    C       C G C G       G A C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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