The detailed information of tRNA gene sequence


Sequence ID>WENV180094924
Genome IDMTBK01039030
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 10817
End posion on genome 10893
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tgctggacga
tRNA gene sequence 
GGGGTCGTAGTTCAGCTGGTTAGAACGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCGGCCCCGCCA
Downstream region at tRNA end position 
tcgtccagcc
Secondary structure (Cloverleaf model)
>WENV180094924	Asp	GTC
                   a      GCCA tcgtccagcc
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T G
                    T     T G C C C     A
      C G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | |                 T T
    G       G A A C
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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