The detailed information of tRNA gene sequence


Sequence ID>WENV180094927
Genome IDMTBK01039207
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 270
End posion on genome 199
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
cactcacgcc
tRNA gene sequence 
GGGCCCGTAGCTCAGCGGCAGAGCAGGCGGCTCATAACCGCTTGGTCGTAGGTTCGAATC
CTACCGGGCCCAtgc
Downstream region at tRNA end position 
tgatttcaat
Secondary structure (Cloverleaf model)
>WENV180094927	Ile2	CAT
                   c      Atgc tgatttcaat
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     C A T C C     A
        G A        A      | | | | |     G
      C     C T C G       G T A G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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