The detailed information of tRNA gene sequence


Sequence ID>WENV180094928
Genome IDMTBK01039209
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 504
End posion on genome 430
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
gaaaaaccta
tRNA gene sequence 
GGCCCCTTGGTCAAGCGGTCAAGACACCACCCTTTCACGGTGGTAACAGGGGTTCGATTC
CCCTAGGGGTCACCA
Downstream region at tRNA end position 
ttatatttgg
Secondary structure (Cloverleaf model)
>WENV180094928	Glu	TTC
                   a      ACCA ttatatttgg
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T T
                    T     T C C C C     A
      C G A        G      | | | | |     G
    G       A C T G       A G G G G     C
    G         | | |                 T T
    T       A G A C
      C A          A     TAAC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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