The detailed information of tRNA gene sequence


Sequence ID>WENV180094930
Genome IDMTBK01039209
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 339
End posion on genome 263
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
accatcatac
tRNA gene sequence 
GGCTCAGTAGCTCAGTTGGTTAGAGTGCCGGCCTGTCACGCCGGAGGTCGAGGGTTCGAG
CCCCTTCTGAGTCGCCA
Downstream region at tRNA end position 
ctttaatttg
Secondary structure (Cloverleaf model)
>WENV180094930	Asp	GTC
                   c      GCCA ctttaatttg
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     A - T
                     G - C          C G
                    T     T T C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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