The detailed information of tRNA gene sequence


Sequence ID>WENV180094943
Genome IDMTBK01039689
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 817
End posion on genome 743
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnngc
tRNA gene sequence 
CGGGGTGTAGCGCAGTCGGCTAGCGCGCTGCGTTTGGGACGCAGAGGTCGGCGGTTCAAG
TCCGCCCACCCCGACag
Downstream region at tRNA end position 
atcatttata
Secondary structure (Cloverleaf model)
>WENV180094943	Pro	TGG
                   c      ACag atcatttata
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C C G C C     A
      T G A        A      | | | | |     A
    C       C G C G       G G C G G     C
    G       | | | |                 T T
    G       G C G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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