The detailed information of tRNA gene sequence


Sequence ID>WENV180094951
Genome IDMTBK01040391
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 344
End posion on genome 417
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tcacggtcgc
tRNA gene sequence 
GTCTCCTTCGTCTAGGGGTTAGGACATCGGGTTTTCATCCCGACAGCAGGGGTTCGAATC
CCCTAGGAGATGCCt
Downstream region at tRNA end position 
atatacggaa
Secondary structure (Cloverleaf model)
>WENV180094951	Glu	TTC
                   c      GCCt atatacggaa
                     G + T
                     T - A
                     C - G
                     T - A
                     C - G
                     C - G
                     T - A          T A
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          A     CAGC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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