The detailed information of tRNA gene sequence


Sequence ID>WENV180094957
Genome IDMTBK01040818
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 375
End posion on genome 460
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ataagaccaa
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTCGATCGCGGCGGTCTTGAAAACCGTTGAAGTGTGAGCTTCC
GGGGGTTCGAATCCCTCCCTCTCCGCtg
Downstream region at tRNA end position 
agagcccaag
Secondary structure (Cloverleaf model)
>WENV180094957	Ser	TGA
                   a      GCtg agagcccaag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       +   | |                 T T
    T       T C G C
      C G A        G     TGAAGTGTGAGCTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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