The detailed information of tRNA gene sequence


Sequence ID>WENV180094962
Genome IDMTBK01040911
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2786
End posion on genome 2713
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
atagaaacac
tRNA gene sequence 
GGGCCCATGGCGCAGTTGGGAGCGCGTCTCAATGGCATTGAGAAGGCCGAGAGTTCGAAT
CTCTCTGGGTCCACtc
Downstream region at tRNA end position 
aaaaacgaac
Secondary structure (Cloverleaf model)
>WENV180094962	Ala	GGC
                   c      ACtc aaaaacgaac
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    T       C G C G       G A G A G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    C - G
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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