The detailed information of tRNA gene sequence


Sequence ID>WENV180094967
Genome IDMTBK01041208
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2534
End posion on genome 2609
Amino Acid Ile2
Anticodon CAT
Upstream region at tRNA start position 
aatccgaact
tRNA gene sequence 
GGACCCCTAGCTCAGTGGTTAGAGCAGCGGACTCATAATCCGTTGGTCCTGGGTTCAAGT
CCCAGGGGGTCCACCA
Downstream region at tRNA end position 
taacattaat
Secondary structure (Cloverleaf model)
>WENV180094967	Ile2	CAT
                   t      ACCA taacattaat
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     C - G
                     C - G          T G
                    T     G A C C C     A
      T G A        A      | | | | |     A
    G       C T C G       C T G G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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