The detailed information of tRNA gene sequence


Sequence ID>WENV180094977
Genome IDMTBK01041860
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 203
End posion on genome 127
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctttatacaT
tRNA gene sequence 
AGGCCAGTAGCTCAATTTGGCAGAGCACCGCTCTCCAAAAGCGGGGGTTGCGGGTTCAAG
TCCTGCCTGGCCTGTCt
Downstream region at tRNA end position 
ggaaatttta
Secondary structure (Cloverleaf model)
>WENV180094977	Trp	CCA
                   T      GTCt ggaaatttta
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T G
                    T     C G T C C     A
      T A A        A      | | + | |     A
    T       C T C G       G C G G G     C
    T       | | | |                 T T
    G       G A G C
      G C A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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