The detailed information of tRNA gene sequence


Sequence ID>WENV180094987
Genome IDMTBK01042812
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 132
End posion on genome 43
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcgccgcccc
tRNA gene sequence 
GGAGAGATGACCGAGTGGTTGAAGGTGCACGCTTGGAAAGCGTGTGTGCGCGGAAGCGTA
CCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
ttttgaaatt
Secondary structure (Cloverleaf model)
>WENV180094987	Ser	GGA
                   c      GCCA ttttgaaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C A       G A G G G     C
    G         | | |                 T T
    T       A G G T
      T G A        G     TGTGCGCGGAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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