The detailed information of tRNA gene sequence


Sequence ID>WENV180094991
Genome IDMTBK01042959
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 5577
End posion on genome 5504
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
caccactatt
tRNA gene sequence 
GGGCCCGTAGCTTAATTGGCAGAGCGCCTGTGTTGCATACAGGAGGTTGTCGGTTCGACT
CCGATCGGGTCCACta
Downstream region at tRNA end position 
tttttgcttt
Secondary structure (Cloverleaf model)
>WENV180094991	Ala	TGC
                   t      ACta tttttgcttt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T C
                    T     T A G C C     A
      T A A        A      + | | | |     G
    T       T T C G       G T C G G     C
    G       + | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  G       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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