The detailed information of tRNA gene sequence


Sequence ID>WENV180095003
Genome IDMTBK01043278
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 663
End posion on genome 574
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccttcggtgt
tRNA gene sequence 
GGAGGGGTGTCCGAGCGGATGAAGGAGGCGGTCTTGAAAACCGTTGAACCTTTGCGGGTT
CCGTGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
taaaaaacaa
Secondary structure (Cloverleaf model)
>WENV180095003	Ser	TGA
                   t      GCCA taaaaaacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G + T
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    A       A G G A
      T G A        G     TGAACCTTTGCGGGTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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