The detailed information of tRNA gene sequence


Sequence ID>WENV180095012
Genome IDMTBK01043757
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 16559
End posion on genome 16486
Amino Acid Gln
Anticodon TTG
Upstream region at tRNA start position 
tacccgttgT
tRNA gene sequence 
TGGGAAGTCGCCAAGTGGTTAAGGCTCTGGTTTTTGGTGCCGGCATCGGGGGTTCGAATC
CCTCCTTCCCAGGaa
Downstream region at tRNA end position 
ggcaatccat
Secondary structure (Cloverleaf model)
>WENV180095012	Gln	TTG
                   T      GGaa ggcaatccat
                     T - A
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | + | | |     G
    G       A C C G       G G G G G     C
    G         | | |                 T T
    T       A G G C
      T A          T     CATC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  T       T
                  T       G
                    T T G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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