The detailed information of tRNA gene sequence


Sequence ID>WENV180095014
Genome IDMTBK01043850
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1291
End posion on genome 1216
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
atctcgtcgc
tRNA gene sequence 
GGAGCCGTGGTGTAGCGGTTAACATGCCGGCCTGTCACGCCGGAGATCGTGGGTTCAAAT
CCCATCGGCTTCGCCA
Downstream region at tRNA end position 
tttgcctcga
Secondary structure (Cloverleaf model)
>WENV180095014	Asp	GTC
                   c      GCCA tttgcctcga
                     G - C
                     G + T
                     A - T
                     G - C
                     C - G
                     C - G
                     G - C          T A
                    T     T A C C C     A
      C G A        G      + | | | |     A
    G       T G T G       G T G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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