The detailed information of tRNA gene sequence


Sequence ID>WENV180095027
Genome IDMTBK01044150
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 375
End posion on genome 299
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccgctaccat
tRNA gene sequence 
GGCGGTGTAGCTCAGATGGCGAGAGCATGCGGTTCATACCCGCAGTGTCCGGGGTTCAAG
TCCCTGCACCGCCACCA
Downstream region at tRNA end position 
aacaacgttt
Secondary structure (Cloverleaf model)
>WENV180095027	Met	CAT
                   t      ACCA aacaacgttt
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     G T C C C     A
      A G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      C G A        A     GTGTC
                    T - A
                    G - C
                    C - G
                    G - C
                    G - C
                  T       C
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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