The detailed information of tRNA gene sequence


Sequence ID>WENV180095029
Genome IDMTBK01044278
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2431
End posion on genome 2356
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctatactttt
tRNA gene sequence 
GCGCCTGTAACTCAGGGGATAGAGTAGCGGACTTCTAATCCGTTTGTCGAGGGTTCGAAT
CCTTCCAGGCGCGCCA
Downstream region at tRNA end position 
ccttgaatgg
Secondary structure (Cloverleaf model)
>WENV180095029	Arg	TCT
                   t      GCCA ccttgaatgg
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C T T C C     A
      G G A        A      | | + | |     G
    G       C T C A       G A G G G     C
    G       | | | |                 T T
    A       G A G T
      T A          A     TTGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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