The detailed information of tRNA gene sequence


Sequence ID>WENV180095031
Genome IDMTBK01044463
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 104
End posion on genome 28
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
aagaggataa
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGTTCGGCTGATAACCGAAAGGTCGATGGTTCGAG
TCCATTTAGGCCCACCA
Downstream region at tRNA end position 
aagagatctt
Secondary structure (Cloverleaf model)
>WENV180095031	Ile	GAT
                   a      ACCA aagagatctt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G + T          T G
                    T     T T A C C     A
      T G A        A      + | | | |     G
    T       C T C G       G A T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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