The detailed information of tRNA gene sequence


Sequence ID>WENV180095034
Genome IDMTBK01044710
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 1968
End posion on genome 2044
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
tgaagagatc
tRNA gene sequence 
GGGCTTGTAGCTCAGTTGGTTAGAGCACGCGCTTGATAAGCGCGGGGTCACTGGTTCAAG
TCCAGTCAGGCCCACCA
Downstream region at tRNA end position 
ctgttgggtt
Secondary structure (Cloverleaf model)
>WENV180095034	Ile	GAT
                   c      ACCA ctgttgggtt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T G A C C     A
      T G A        A      | | | | |     A
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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