The detailed information of tRNA gene sequence


Sequence ID>WENV180095044
Genome IDMTBK01045139
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 153
End posion on genome 228
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ccaccatcat
tRNA gene sequence 
GGGGATATGGCGCAGCTGGGAGCGCGTCTGCTTCGCATGCAGAAGGCCGGGGGTTCGAAT
CCCCCTATCTCCACCA
Downstream region at tRNA end position 
tgagcgaaag
Secondary structure (Cloverleaf model)
>WENV180095044	Ala	CGC
                   t      ACCA tgagcgaaag
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    T       C G C G       G G G G G     C
    G       | | | |                 T T
    G       G C G C
      G A          G     AGGCC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  T       T
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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