The detailed information of tRNA gene sequence


Sequence ID>WENV180095047
Genome IDMTBK01045246
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 127
End posion on genome 217
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agaaagttat
tRNA gene sequence 
GGAGGGATACCCAAGAGGCTGAAGGGGGTAGTTTGCTAAACTGCTAGTGGGGGCAACTCC
AGCGAGAGTTCGAATCTCTCTCCCTCCGCCA
Downstream region at tRNA end position 
agtaacttag
Secondary structure (Cloverleaf model)
>WENV180095047	Ser	GCT
                   t      GCCA agtaacttag
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C T C     A
      A G A        A      | | | | |     G
    G       A C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGTGGGGGCAACTCCAGC
                    G - C
                    T + G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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