The detailed information of tRNA gene sequence


Sequence ID>WENV180095051
Genome IDMTBK01045310
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 4282
End posion on genome 4209
Amino Acid fMet
Anticodon CAT
Upstream region at tRNA start position 
aattcttgat
tRNA gene sequence 
CGCGGAGTGGAGCAGTTGGTAGCTCGTTGGGCTCATAACCCAAAGGTCGGAGGTTCGAGT
CCTCCCTCCGCTACaa
Downstream region at tRNA end position 
caaaaaaaga
Secondary structure (Cloverleaf model)
>WENV180095051	fMet	CAT
                   t      ACaa caaaaaaaga
                     C   T
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C C T C C     A
      T G A        G      | | | | |     G
    T       C G A G       G G A G G     C
    G       | | | |                 T T
    G       G C T C
      T A          G     AGGTC
                    T - A
                    T - A
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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