The detailed information of tRNA gene sequence


Sequence ID>WENV180095055
Genome IDMTBK01045647
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 2420
End posion on genome 2346
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
gaatttgggt
tRNA gene sequence 
TCCAGCGTAGCTCAATGGTAGAGCGGTTGGCTGTTAACCAATAGGTTACAGGTTCGAGTC
CTGTCGCTGGAGCCA
Downstream region at tRNA end position 
atttttcgct
Secondary structure (Cloverleaf model)
>WENV180095055	Asn	GTT
                   t      GCCA atttttcgct
                     T - A
                     C - G
                     C - G
                     A - T
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
        A A        A      | | | | |     G
      T     C T C G       A C A G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTT
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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