The detailed information of tRNA gene sequence


Sequence ID>WENV180095058
Genome IDMTBK01045873
Search identical group
Phylum/Class[MTBK] anaerobic digester metagenome; biogas reactors fed with pig manure or primary and secondary sludge
Species
Start position on genome 21362
End posion on genome 21441
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
taaaagtatT
tRNA gene sequence 
CGGGATGTAGTTCAGTCCGGTTAGAATGCCTGGTTTGGGACCAGGTGGTCGAAGGTTCGA
ATCCTTTCATCCCGACCC
Downstream region at tRNA end position 
Agaaacggaa
Secondary structure (Cloverleaf model)
>WENV180095058	Pro	TGG
                   T      ACCC Agaaacggaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T T T C C     A
    C T G A        A      + | | | |     G
  C         C T T G       G A A G G     C
  G         | | | +                 T T
  G         G A A T
    T T A          G     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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